Month: May 2020

Two new publications on lichens

Emmanuelia patinifera (photo Lücking)
Emmanuelia patinifera (photo Lücking)

We propose a new genus to accommodate some species of lichenized fungi from the New World, including the Southeastern United States, in a new genus, as part of the ongoing studies of the evolution of the Lobariaceae.

Simon A., R. Lücking, B. Moncada, J.A. Mercado-Díaz, F. Bungartz, M. Cáceres, E. Gumboski, S. Maria de Azevedo Martinsi, D. Parker & B. Goffinet. 2020. Emmanuelia, a new genus of lobarioid lichen-forming fungi (lichenized Ascomycota: Peltigerales). Plant and Fungal Systematics 65: 76–94. pdf

Abstract reads: The former family Lobariaceae, now included in Peltigeraceae as subfamily Lobarioideae, has undergone substantial changes in its generic classification in recent years, based on phylogenetic inferences highlighting the polyphyly of the speciose genera Lobaria, Pseudocyphellaria and Sticta. Here we introduce the new genus Emmanuelia, named in honor of Prof. Emmanuël Sérusiaux for his extensive work on the Peltigerales. Emmanuelia currently comprises twelve species. It is superficially similar to the lobarioid genus Ricasolia, but differs by its apothecia, rimmed by overarching and often crenulate to lobulate margins, with the parathecium (proper excipulum) and the amphithecium (thalline excipulum formed by the thallus cortex) apically separated and of a different structure. Also, ascospore dimensions and shape differ between the two genera, with the ascospores of Emmanuelia being longer and narrower. Molecular phylogenetic analyses using DNA nucleotide sequences of the internal transcribed spacer region (ITS) and the small subunit of mitochondrial ribosomal DNA (mtSSU) confirm that Emmanuelia belongs to the Lobaria s.lat. clade and forms a monophyletic group sister to the lineage consisting of Dendriscosticta, Lobariella and Yoshimuriella. None of the available generic names of lobarioid lichens can be applied to this group, and consequently a new name is proposed for this new genus, which is typified with E. ravenelii comb. nov. Eleven other species are transferred to Emmanuelia: E. americana comb. nov., E. conformis comb. nov., E. cuprea comb. nov., E. elaeodes comb. nov., E. erosa comb. nov., E. excisa comb. nov., E. lobulifera comb. nov., E. ornata comb. nov., E. patinifera comb. nov., E. pseudolivacea comb. nov. and E. tenuis comb. nov. The genus is represented in North America by three species, including E. lobulifera, which is resurrected from synonymy with E. (Lobaria) tenuis, a South American species, and E. ornata, whose populations were previously treated under E. (Lobaria) ravenelii.

 

Suspected to represent a new species, populations of Peltigera from Papua New Guinea are now recognized as P. serusiauxii: Magain N., B. Goffinet, A. Simon, J. Seelan Sathiya, I. Medeiros, F. Lutzoni & J. Miadlikowska. 2020. Peltigera serusiauxii, a new species in section Polydactylon from Papua New Guinea and Malaysia (Lecanoromycetes, Ascomycota). Plant and Fungal Systematics 65: 139–146. pdf

Abstract reads: Peltigera serusiauxii is proposed here as a new species from Papua New Guinea and Sabah, northern Borneo (Malaysia). The species belongs to the polydactyloid clade of section Polydactylon. Because of its large thalli with a glabrous upper surface, this species was previously identified as P. dolichorhiza, but it differs by its polydactylon-type lower surface and the high amount of dolichorrhizin. It appears to be a strict specialist in its association with Nostoc phylogroup IX throughout its known distribution. This is one of many undescribed species remaining to be formally described within the genus Peltigera,especially in Asia and Australasia.

 

New publication on tardigrades!

mple of the possible mechanism of endozoochorous dispersal of tardigrades by White-bellied Seedsnipe (Attagis malouinus).

It started with a search for bryophyte fragments in the feces of high Andean birds on Navarino island (see post) when Michael Robertson and Nicholas Russo (former EEB student now at UCLA) discovered tardigrades in the samples. Their observation are now published in Polar Biology.

Robertson M.W., N.J. Russo, S.J. McInnes, B. Goffinet & J.E. Jiménez. 2020. Potential dispersal of tardigrades by birds through endozoochory: evidence from sub-Antarctic White-bellied Seedsnipe (Attagis malouinus). Polar Biology in press.

Abstract reads: Tardigrades are potentially dispersed by birds, but the extent of the interactions between birds and tardigrades is virtually unknown. We discovered nine tardigrades within feces of White-bellied Seedsnipe (Attagis malouinus) collected from high Andean tundra on Navarino Island, Chile. Eight of the tardigrade specimens began moving once rehydrated. Two specimens belonged to the genus Adropion (Hypsibiidae), one to the Macrobiotus (Macrobiotidae), and five could not be identified. A ninth specimen was a species of Isohypsibius in an embryonic egg state. These tardigrades could have passed through the avian digestive tract after incidental ingestion or burrowed into the feces post-defecation to feed on microorganisms and undigested plant matter present in the feces. To our knowledge, this is the first discovery of tardigrades in bird feces and may have implications for tardigrade distributions if birds transport tardigrades endogenously.

New publication on bryophytes

Juan Carlos Villarreal published the last chapter of his dissertation, focused on the population genetic study of Nothoceros aenigmaticus, a clonal hornwort with allopatric sexual populations. The study was picked up and completed by Juan Carlos’ postdoc, Marta Alonso Garcia, who had visited our lab when she was finishing her Ph.D. in Murcia, Spain. Alonso Garcia M., Villarreal J.C., K. McFarland & B. Goffinet. 2020. Population genomics confirms extreme sex ratio of a clonal bryophyte. Frontiers in Plant Science 11: 495. pdf

 

Abstract reads: The southern Appalachian (SA) is one of the most biodiversity−rich areas in North America and has been considered a refugium for many disjunct plant species, from the last glacial period to the present. Our study focuses on the SA clonal hornwort, Nothoceros aenigmaticus J.C. Villarreal & K.D. McFarland. This hornwort was described from North Carolina and is widespread in the SA, growing on rocks near or submerged in streams in six and one watersheds of the Tennessee (TR) and Alabama (AR) Rivers, respectively. Males and female populations occur in different watersheds, except in the Little Tennessee (TN) River where an isolated male population exists ca. 48 km upstream from the female populations. The sex ratio of 1:0 seems extreme in each population. In this study, we use nuclear and organellar microsatellites from 250 individuals from six watersheds (seven populations) in the SA region and two populations from Mexico (23 individuals). We, then, selected 86 individuals from seven populations and used genotyping by sequencing to sample over 600 bi-allelic markers. Our results suggest that the SA N. aenigmaticus and Mexican plants are a nested within a clade of sexual tropical populations. In the US populations, we confirm an extreme sex ratio and only contiguous US watersheds share genotypes. The phylogenetic analysis of SNP data resolves four clusters: Mexican populations, male plants (Little Pigeon and Pigeon river watersheds) and two clusters of female plants; one from the Little Tennessee and Hiwassee Rivers (TR) and the other from the Ocoee (TR) and Coosa (AR) Rivers. All clusters are highly differentiated (Fst values over 0.9). In addition, our individual assignment analyses and PCAs reflect the phylogenetic results grouping the SA samples in three clades and recovering males and female plants with high genetic differentiation (Fst values between 0.5 and 0.9 using microsatellites and bi-allelic markers). Our results point to Pleistocene events shaping the biogeographical pattern seen in US populations. The extreme sex ratio reflects isolation and highlights the high vulnerability of the populations in the SA.